Principal Graph

Robust and scalable learning of complex intrinsic dataset geometry via ElPiGraph
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Luca Albergante, Evgeny Mirkes, Jonathan Bac, Huidong Chen, Alexis Martin, Louis Faure, Emmanuel Barillot, Luca Pinello, Alexander Gorban, Andrei Zinovyev
Robust and scalable learning of complex intrinsic dataset geometry via ElPiGraph
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM
An interactive pipeline capable of disentangling and visualizing complex branching trajectories from both single-cell transcriptomic and epigenomic data.
Huidong Chen, Luca Albergante, Jonathan Y. Hsu, Caleb A. Lareau, Giosuè Lo Bosco, Jihong Guan, Shuigeng Zhou, Alexander N. Gorban, Daniel E. Bauer, Martin J. Aryee, David M. Langenau, Andrei Zinovyev, Jason D. Buenrostro, Guo-Cheng Yuan, Luca Pinello
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM