Pseudotime

Current progress and potential opportunities to infer single-cell developmental trajectory and cell fate
Click the Cite button above to demo the feature to enable visitors to import publication metadata into their reference management software. Create your slides in Markdown - click the Slides button to check out the example.
Lingfei Wang, Qian Zhang, Qian Qin, Nikolaos Trasanidis, Michael Vinyard, Huidong Chen, Luca Pinello
Current progress and potential opportunities to infer single-cell developmental trajectory and cell fate
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM
An interactive pipeline capable of disentangling and visualizing complex branching trajectories from both single-cell transcriptomic and epigenomic data.
Huidong Chen, Luca Albergante, Jonathan Y. Hsu, Caleb A. Lareau, Giosuè Lo Bosco, Jihong Guan, Shuigeng Zhou, Alexander N. Gorban, Daniel E. Bauer, Martin J. Aryee, David M. Langenau, Andrei Zinovyev, Jason D. Buenrostro, Guo-Cheng Yuan, Luca Pinello
Single-cell trajectories reconstruction, exploration and mapping of omics data with STREAM
Dissecting hematopoietic and renal cell heterogeneity in adult zebrafish at single-cell resolution using RNA sequencing
Click the Cite button above to demo the feature to enable visitors to import publication metadata into their reference management software. Create your slides in Markdown - click the Slides button to check out the example.
Qin Tang, Sowmya Iyer, Riadh Lobbardi, John C. Moore, Huidong Chen, Caleb Lareaun, Christine Hebert, McKenzie L. Shaw, Cyril Neftel, Mario L. Suva, Craig J. Ceol, Andre Bernards, Martin Aryee, Luca Pinello, Iain A. Drummond, David M. Langenau
Dissecting hematopoietic and renal cell heterogeneity in adult zebrafish at single-cell resolution using RNA sequencing